Ill pop my vote in, but take it as you will as im far from an expert in College Football and its quirks etc
But this is my reasoning based on how id do it, not necessarily how the rules or expectations are in game/real life:
Team B
1 loss compared to 2
Conference Champions
Team A lost to a 6-6 team
Although they lost the Team A vs B matchup; there are circumstances in there to dispute why A is better than B.
Honestly i have no idea how the NCAA ranks its teams, we get College Football on TV in the UK, but thats as far as my knowledge goes.
So i doubt it helps, but its good for me to learn as id like to try to follow some of the dynasties on here and know whats happening