Yep that's new this year.
When you don't, you'll see "Autobaserunning On".
If you want manual control for the rest of that play, issue a command to a runner (or even just move the L-stick like you're selecting a runner), and you'll go into manual baserunning.
I don't know what interface it is (classic, default, etc) but yeah you can take command even when defaulting to autobaserunning.

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